Publications

November

United States Emergency Department Use of Medications with Pharmacogenetic Recommendations
Western Journal of Emergency Medicine
Deepak Voora | Nov. 2021

Comparing the Diagnostic Accuracy of Clinician Judgement to a Novel Host Response Diagnostic for Acute Respiratory Illness
Open Forum Infectious Diseases
Micah McClain, Geoffrey Ginsburg, Christopher Woods, Ephraim Tsalik | Nov. 2021

October

Aspirin effects on platelet gene expression are associated with a paradoxical, increase in platelet function
British Journal of Clinical Pharmacology
Rachel Myers, Geoff Ginsburg, Deepak Voora | Oct. 2021

Pathogenesis insights from an ancient and ubiquitous spirochete
PLOS Pathogens
Christopher Woods | Oct. 2021

Experience and Perceptions of a Family Health History Risk Assessment Tool among Multi-Ethnic Asian Breast Cancer Patients
Journal of Personalized Medicine
Ryanne Wu, Lori Orlando, Geoffrey Ginsburg | Oct. 2021

Use of Machine Learning–Based Software for the Screening of Thyroid Cytopathology Whole Slide Images
Archives of Pathology & Laboratory Medicine
Ricardo Henao | Oct. 2021

Revisiting Secondary Information Related to Pharmacogenetic Testing
Frontiers in Genetics
Susanne B. Haga | Oct. 2021

The Prevalence of Fibromyalgia Syndrome in Active Duty Military Personnel
Arthritis Care & Research
Douglas E. Williamson | Oct. 2021

September

Learning Hierarchical Document Graphs From Multilevel Sentence Relations
IEEE Transactions on Neural Networks and Learning Systems
Ricardo Henao | Sept. 2021

Assessment of the Feasibility of Using Noninvasive Wearable Biometric Monitoring Sensors to Detect Influenza and the Common Cold Before Symptom Onset
JAMA Network Open
Micah McClain, Christopher Woods, Ephraim Tsalik, Ricardo Henao, Geoffrey Ginsburg | Sept. 2021

Platelets amplify endotheliopathy in COVID-19
Science Advances
Deepak Voora | Sept. 2021

August

Heparin-based blood purification attenuates organ injury in baboons with Streptococcus pneumoniae pneumonia
Am J Physiol Lung Cell Mol Physiol.
Geoffrey Ginsburg, Ephraim Tsalik, Chris Woods| Aug 2021 

July

Strategies to Integrate Genomic Medicine into Clinical Care: Evidence from the IGNITE Network
J Pers Med.
Geoffrey Ginsburg, Tejinder Rakhra-Burris, Lori Orlando, Olivia Dong| July 2, 2021 

Establishing the value of genomics in medicine: the IGNITE Pragmatic Trials Network
Genetics in Medicine.
Geoffrey Ginsburg, Tejinder Rakhra-Burris, Lori Orlando, Deepak Voora| July 2, 2021 

The host transcriptional response to Candidemia is dominated by neutrophil activation and heme biosynthesis and supports novel diagnostic approaches
Genome Medicine.
Geoffrey Ginsburg, Rachel Myers, Ephraim Tsalik, Ricardo Henao, Chris Woods, Micah McClain| July 5, 2021 

June

Multiplexed, quantitative serological profiling of COVID-19 from blood by a point-of-care test
Sci Adv.
Jack Anderson, Tom Burke, Chris Woods| Jun 25, 2021 

Signatures of mast cell activation are associated with severe COVID-19
medRxiv.
Tom Burke, Chris Woods | June 1, 2021 

May

An atlas connecting shared genetic architecture of human diseases and molecular phenotypes provides insight into COVID-19 susceptibility
Genome Med.
Floricia Constantine, Ricardo Henao, Tom Burke, Micah McClain, Ephraim Tsalik, Geoffrey Ginsburg, Chris Woods| May 17, 2021 

Neutralizing antibody vaccine for pandemic and pre-emergent coronaviruses
Nature
Elizabeth Petzold, Chris Woods | May 10, 2021 

April​

Discriminating Bacterial and Viral Infection Using a Rapid Host Gene Expression Test
Crit Care Med
Ephraim Tsalik, Ricardo Henao, Elizabeth Petzold, Micah McClain, Geoffrey Ginsburg, Tom Burke, Chris Woods | April 28, 2021 

Asymptomatic or mild symptomatic SARS-CoV-2 infection elicits durable neutralizing antibody responses in children and adolescents
medRxiv
Tom Burke, Micah McClain, Elizabeth Petzold, Chris Woods | April 30, 2021 

Mucosal Associated Invariant T (MAIT) Cell Responses Differ by Sex in COVID-19
Med (NY)
Ephraim Tsalik, Tom Burke, Micah McClain, Chris Woods | April 13, 2021 

March

Clinical implementation of an oncology-specific family health history risk assessment tool
Hered Cancer Clin Practice
Geoff Ginsburg, Lori Orlando, Ryanne Wu| March 29, 2021 

February

Symptom Monitoring in Children With Life-Threatening Illness
Advances in Nursing Science
Ryan Shaw | February 17, 2021 

Dysregulated transcriptional responses to SARS-CoV-2 in the periphery
Nature Communications
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Emily Ko, Yiling Liu, Micah McClain, Elizabeth Petzold, Julie Steinbrink, Ephraim Tsalik and Chris Woods | February 17, 2021

Antibacterial Resistance Leadership Group 2.0 – Back to Business
Clinical Infectious Diseases
Ephraim Tsalik | February 15, 2021

Sepsis Subclasses: A Framework for Development and Interpretation
Crit Care Med
Ephraim Tsalik | February 15, 2021

January

Validation of a host gene expression test for bacterial/viral discrimination in immunocompromised hosts
Clinical Infectious Diseases
Geoff Ginsburg, Ricardo Henao, Micah McClain, Sunil Suchindran, Ephraim Tsalik and Chris Woods | January 19, 2021

The Potential Benefit of Expedited Development and Approval Programs in Precision Medicine
Journal of Personalized Medicine
Susanne Haga | January 14, 2021

Family history assessment significantly enhances delivery of precision medicine in the genomics era
BMC
Geoff Ginsburg, Lori Orlando and Ryanne Wu | January 7, 2021

Veterans Affairs Pharmacogenomic Testing for Veterans (PHASER) clinical program
Pharmacogenomics
Olivia Dong and Deepak Voora | January 6, 2021

2020

December

Digital Health—The Need to Assess Benefits, Risks, and Value
JAMA
Erik Perakslis and Geoff Ginsburg;| December 28, 2020

An atlas connecting shared genetic architecture of human diseases and molecular phenotypes provides insight into COVID-19 susceptibility
Genome Medicine
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Emily Ko, Micah McClain, Ephraim Tsalik and Chris Woods | December 22, 2020

Chromatin remodeling in peripheral blood cells reflects COVID-19 symptom severity
bioRXiv
Tom Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Ephraim Tsalik and Chris Woods | December 9, 2020

Genomic Medicine Year in Review: 2020
The American Journal of Human Genetics
Geoff Ginsburg | December 3, 2020

November

Adaptive multi-channel event segmentation and feature extraction for monitoring health outcomes
IEEE Xplore
Geoff Ginsburg, Ricardo Henao and Chris Woods | November 17, 2020

At the intersection of precision medicine and population health: an implementation-effectiveness study of family health history based systematic risk assessment in primary care
BMC Health Services Research
Teji Rahkra-Burris, Geoff Ginsburg, Rachel Myers, Lori Orlando and Ryanne Wu | November 7, 2020

Platelet reactivity in response to aspirin and ticagrelor in African-Americans and European-Americans
Journal of Thrombosis and Thrombolysis
Deepak Voora and Geoff Ginsburg | November 6, 2020

Impact of the COVID-19 pandemic on patterns of outpatient cardiovascular care
American Heart Journal
Ricardo Henao | November 1, 2020

October

Variant Interpretation in Current Pharmacogenetic Testing 
Journal of Personalized Medicine
Lori Orlando | October 31, 2020

Calibration and Uncertainty in Neural Time-to-Event Modeling
IEEE Transactions on Neural Networks and Learning Systems
Ricardo Henao | October 29, 2020

Selecting Mobile Health Technologies for Electronic Health Record Integration: Case Study
Journal of Medical Internet Research
Ryan Shaw | October 28, 2020

Use of Natural Language Processing to Improve Identification of Patients With Peripheral Artery Disease
Circulation: Cardiovascular Interventions
Ricardo Henao | October 12, 2020

Individualizing pharmacogenomic test results in context of the microbiome
Personalized Medicine
Susanne Haga | October 7, 2020

September

Global approaches to genomic medicine implementation
Science Translational Medicine
Geoff Ginsburg | September 30, 2020

A blood-based host gene expression assay for early detection of respiratory viral infection: an index-cluster prospective cohort study
The Lancet Infectious Diseases
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Anna Mazur, Micah McClain, Sunil Suchindran, Ephraim Tsalik and Chris Woods | September 24, 2020

The Line Snuggler: A Central Line Bundling Innovation Evaluated in a High-Risk Pediatric Population
Journal of Pediatric Oncology Nursing
Ryan Shaw | September 19, 2020

Variational Disentanglement for Rare Event Modeling
arXiv
Ricardo Henao | September 17, 2020

August

Identification of Undetected Monogenic Cardiovascular Disorders
Journal of the American College of Cardiology
Ricardo Henao | August 18, 2020

July

Association of Hepatic Steatosis With Major Adverse Cardiovascular Events, Independent of Coronary Artery Disease
Clinical Gastroenterology and Hepatology
Geoff Ginsburg and Deepak Voora | July 21, 2020

Influence of Sex on Platelet Reactivity in Response to Aspirin
Journal of the American Heart Association
Geoff Ginsburg, Rachel Myers and Deepak Voora | July 11, 2020

User-Centered App Design for Acutely Ill Children and Adolescents
Journal of Pediatric Oncology Nursing
Ryan Shaw | July 10, 2020

June

Neuroendocrine Biomarkers of Prolonged Exposure Treatment Response in Military-Related PTSD
Psychoneuroendocrinology
Douglas Williamson | June 8, 2020

May

Previously Derived Host Gene Expression Classifiers Identify Bacterial and Viral Etiologies of Acute Febrile Respiratory Illness in a South Asian Population
Open Forum Infectious Diseases
Thomas Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Sunil Suchindran, Ephraim Tsalik and Chris Woods  | May 26, 2020

Towards digital-based interventions for medication adherence and safety
Expert Opinion on Drug Safety
Susanne Haga | May 5, 2020

April​

The enduring importance of family health history in the era of genomic medicine and risk assessment
Personalized Medicine
Susanne Haga and Lori Orlando | April 22, 2020

Promoting Wellness Through Mobile Health Technology in a College Student Population: Protocol Development and Pilot Study
JMIR Research Protocols
Geoff Ginsburg, Susanne Haga and Ryan Shaw | April 3, 2020

March

Evaluation of family health history collection methods impact on data and risk assessment outcomes
Preventive Medicine Reports
Geoff Ginsburg, Lori Orlando, Ryanne Wu | March 5, 2020

Self-monitoring diabetes with multiple mobile health devices
Journal of the American Medical Informatics Association
Ryan Shaw | March 5, 2020

February

January

Enabling Technologies for Personalized and Precision Medicine
Trends in Biotechnology
Geoff Ginsburg | January 21, 2020

2019

December

Increased Glutaminolysis Marks Active Scarring in Nonalcoholic Steatohepatitis Progression
Cellular and Molecular Gastroenterology and Hepatology
Ricardo Henao | December 24, 2019

Geospatial analysis of dengue emergence in rural areas in the Southern Province of Sri Lanka
Transactions of the Royal Society of Tropical Medicine & Hygiene
Chris Woods | December 24, 2019

Genomic Medicine Year in Review: 2019
American Journal of Human Genetics
Geoff Ginsburg | December 5, 2019

November

Affiliate network members as force amplifiers of genomic medicine research
Personalized Medicine
Geoff Ginsburg | November 11, 2019

October

Direct-from-blood RNA sequencing identifies the cause of post-bronchoscopy fever
BMC Infectious Diseases
Tom Burke, Ephraim Tsalik and Chris Woods | October 28, 2019

Awareness of family health history in a predominantly young adult population
PLOS One
Susanne Haga, Rachel Myers and Lori Orlando | October 25, 2019

Validation of a host response test to distinguish bacterial and viral respiratory infection
EBioMedicine
Tom Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Ephraim Tsalik and Chris Woods | October 17, 2019

Pharmacogenomic Testing In Pediatrics: Navigating The Ethical, Social, and Legal Challenges
Pharmacogenomics and Personalized Medicine
Susanne Haga | October 14, 2019

Specific Immunologic Countermeasure Protocol for Deep-Space Exploration Missions
Frontiers in Immunology
Geoff Ginsburg | October 11, 2019

A stepwise approach to implementing pharmacogenetic testing in the primary care setting
Future Medicine
Susanne Haga and Ryanne Wu | October 7, 2019

September

Managing Increased Accessibility to Pharmacogenomic Data
Clinical Pharmacology and Therapeutics
Susanne Haga | September 3, 2019

August

Facilitating translational team science: The project leader model
Journal of Clinical and Translational Science
Geoff Ginsburg and Tim Veldman | August 28, 2019

Family health history: underused for actionable risk assessment
The Lancet
Geoff Ginsburg, Lori Orlando and Ryanne Wu | August 5, 2019

 

July

Host-Based Diagnostics for Acute Respiratory Infections
Clinical Therapeutics
Ephraim Tsalik | July 25, 2019

What will it take to implement genomics in practice? Lessons from the IGNITE Network
Personalized Medicine
Geoff Ginsburg and Lori Orlando | July 23, 2019

Access to Genetic Counselors in the Southern United States
Journal of Personalized Medicine
Susanne Haga | July 1, 2019

June

Pharmacogenomics courses in pharmacy school curricula
Pharmacogenomics
Susanne Haga | June 20, 2019

Educating healthcare providers in the delivery of genomic medicine
Personalized Medicine
Jenny McCarthy | June 13, 2019

First Responder to Genomic Information: A Guide for Primary Care Providers
Molecular Diagnosis & Therapy 
Susanne Haga | June 7, 2019

Average Weighted Accuracy (AWA): A Pragmatic Analysis for a RADICAL Study
Clinical Infectious Disease
Ricardo Henao, Ephraim Tsalik, and Chris Woods | June 3, 2019

May

Primary Care Physicians' Knowledge, Attitudes, and Experiences with Personal Genetic Testing
Journal of Personalized Medicine
Susanne Haga, Geoff Ginsburg and Rachel Myers | May 24, 2019

Frontal Lobe Circuitry in Posttraumatic Stress Disorder
Chronic Stress
Douglas Williamson | May 23, 2019

An epidemiological evaluation of trauma types in cohort of deployed service members
Psychological Trauma: Theory, Research, Practice, and Policy
Douglas Williamson | May 9, 2019

Diabetes Mobile Care: Aggregating and Visualizing Data from Multiple Mobile Health Technologies
AMIA Summits on Translational Science Proceedings
Ryan Shaw | May 6, 2019

April

Bridging the integration gap between patient-generated blood glucose data and electronic health records
Journal of the American Medical Informatics Association
Ryan Shaw | April 22, 2019

Two Approaches to Classifying and Quantifying Physical Resilience in Longitudinal Data
The Journals of Gerontology
Micah McClain | April 17, 2019

A Decade On: Systematic Review of Clinical Trials.gov Infectious Disease Trials, 2007 - 2017
Open Forum Infectious Diseases
Ephraim Tsalik | April 15, 2019

A host gene expression approach for identifying triggers of asthma exacerbations
PLOS One
Tom Burke, Geoff Ginsburg, Ricardo Henao, Anna Mazur, Micah McClain, Ephraim Tsalik and Chris Woods | April 8, 2019

March

IGNITE network: Response of patients to genomic medicine interventions
Molecular Genetics & Genomic Medicine
Rachel Myers and Lori Orlando | March 20, 2019

Effect of Sociodemographic Factors on Uptake of a Patient-Facing Information Technology Family Health History Risk Assessment Platform
Applied Clinical Informatics
Teji Rakhra-Burris, Geoff Ginsburg, Susanne Haga, Rachel Myers, Lori Orlando, Nina Sperber and Ryanne Wu | March 13, 2019

A Global Collaborative to Advance Genomic Medicine
American Journal of Human Genetics
Geoff Ginsburg | March 7, 2019

February

Pilot study of myocardial ischemia-induced metabolomic changes in emergency department patients undergoing stress testing
PLOS One
Geoff Ginsburg, Ricardo Henao, Ephraim Tsalik, Deepak Voora and Chris Woods | February 1, 2019

January

Single-Molecule hsTnl and Short-Term Risk in Stable Patients With Chest Pain
Journal of the American College of Cardiology
Geoff Ginsburg and Sunil Suchindran | January 29, 2019

Note: Only CAGPM affiliated authors listed.