Publications

April

Discriminating Bacterial and Viral Infection Using a Rapid Host Gene Expression Test
Crit Care Med
Ephraim Tsalik, Ricardo Henao, Elizabeth Petzold, Micah McClain, Geoffrey Ginsburg, Tom Burke, Chris Woods | April 28, 2021

Colonization with multidrug-resistant Enterobacteriaceae among infants: an observational study in southern Sri Lanka
Antimicrob Resist Infect Control
Chris Woods | April 30, 2021

Perceptions of Using Multiple Mobile Health Devices to Support Self-Management Among Adults With Type 2 Diabetes: A Qualitative Descriptive Study
J Nurs Scholarsh
Ryan Shaw | April 29, 2021

Asymptomatic or mild symptomatic SARS-CoV-2 infection elicits durable neutralizing antibody responses in children and adolescents
medRxiv
Tom Burke, Micah McClain, Elizabeth Petzold, Chris Woods | April 30, 2021

Mucosal Associated Invariant T (MAIT) Cell Responses Differ by Sex in COVID-19
Med (NY)
Ephraim Tsalik, Tom Burke, Micah McClain, Chris Woods | April 13, 2021

March

Establishing the value of genomics in medicine: the IGNITE Pragmatic Trials Network
Genetics in Medicine
Geoff Ginsburg, Lori Orlando, Teji Rakhra-Burris and Deepak Voora | March 29, 2021

Barriers to implementing antimicrobial stewardship programs in three low- and middle-income country tertiary care settings: findings from a multi-site qualitative study
Antimicrobial Resistance & Infection Control
Chris Woods | March 25, 2021

Age-related changes in the upper respiratory microbiome are associated with SARS-CoV-2 susceptibility and illness severity
medRxiv
Sarah Heston and Chris Woods | March 23, 2021

February

Symptom Monitoring in Children With Life-Threatening Illness
Advances in Nursing Science
Ryan Shaw | February 17, 2021

SARS-CoV-2 vaccination induces neutralizing antibodies against pandemic and pre-emergent SARS-related coronaviruses in monkeys
bioRxiv
Elizabeth Petzold and Chris Woods | February 17, 2021

Dysregulated transcriptional responses to SARS-CoV-2 in the periphery
Nature Communications
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Emily Ko, Yiling Liu, Micah McClain, Elizabeth Petzold, Julie Steinbrink, Ephraim Tsalik and Chris Woods | February 17, 2021

Identifying suicidal subtypes and dynamic indicators of increasing and decreasing suicide risk in active duty military personnel: Study protocol
Contemporary Clinical Trials Communications
Douglas Williamson | February 16, 2021

Antibacterial Resistance Leadership Group 2.0 – Back to Business
Clinical Infectious Diseases
Ephraim Tsalik | February 15, 2021

Sepsis Subclasses: A Framework for Development and Interpretation
Crit Care Med
Ephraim Tsalik | February 15, 2021

Association of Metabolic Phenotypes With Coronary Artery Disease and Cardiovascular Events in Patients With Stable Chest Pain
Diabetes Care
Nathan Bihlmeyer and Geoff Ginsburg | February 8, 2021

January

Point-prevalence survey of outpatient antibiotic prescription at a tertiary medical center in Sri Lanka: opportunities to improve prescribing practices for respiratory illnesses
BMC Infectious Diseases
Chris Woods | January 21, 2021

Validation of a host gene expression test for bacterial/viral discrimination in immunocompromised hosts
Clinical Infectious Diseases
Geoff Ginsburg, Ricardo Henao, Micah McClain, Sunil Suchindran, Ephraim Tsalik and Chris Woods | January 19, 2021

North Carolina's multi-institutional pharmacogenomics efforts with the NC precision health collaborative
Future Medicine
Deepak Voora | January 15, 2021

The Potential Benefit of Expedited Development and Approval Programs in Precision Medicine
Journal of Personalized Medicine
Susanne Haga | January 14, 2021

Racial, Ethnic, and Geographic Disparities in Novel Coronavirus (Severe Acute Respiratory Syndrome Coronavirus 2) Test Positivity in North Carolina
Open Forum Infectious Diseases
Chris Woods | January 11, 2021

Family history assessment significantly enhances delivery of precision medicine in the genomics era
BMC
Geoff Ginsburg, Lori Orlando and Ryanne Wu | January 7, 2021

Veterans Affairs Pharmacogenomic Testing for Veterans (PHASER) clinical program
Future Medicine
Olivia Dong and Deepak Voora | January 6, 2021

Serum Bile Acid, Vitamin E, and Serotonin Metabolites Are Associated With Future Liver‐Related Events in Nonalcoholic Fatty Liver Disease
Hepatology Communications
Ricardo Henao | January 5, 2021

The functions of SARS-CoV-2 neutralizing and infection-enhancing antibodies in vitro and in mice and nonhuman primates
bioRxiv
Elizabeth Petzold and Chris Woods | January 2, 2021

2020

December

An atlas connecting shared genetic architecture of human diseases and molecular phenotypes provides insight into COVID-19 susceptibility
medRxiv
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Emily Ko, Micah McClain, Ephraim Tsalik and Chris Woods | December 22, 2020

Chromatin remodeling in peripheral blood cells reflects COVID-19 symptom severity
bioRXiv
Tom Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Ephraim Tsalik and Chris Woods | December 9, 2020

Predicting Hospital Utilization and Inpatient Mortality of Patients Tested for COVID-19
medRXiv
Ricardo Henao| December 7, 2020

Surgeon Applications of Patient Preferences in Treatment Decision Making for First-Time Anterior Shoulder Dislocation
Orthopaedic Journal of Sports Medicine
Lori Orlando| December 4, 2020

Genomic Medicine Year in Review: 2020
The American Journal of Human Genetics
Geoff Ginsburg | December 3, 2020

November

A randomized feasibility pilot trial of a financial incentives intervention for dietary self-monitoring and weight loss in adults with obesity
Translational Behavioral Medicine
Ryan Shaw | November 27, 2020

Convolutional neural network to identify symptomatic Alzheimer’s disease using multimodal retinal imaging
British Journal of Ophthalmology
Ricardo Henao | November 26, 2020

Modeling statin myopathy in a human skeletal muscle microphysiological system
PLOS ONE
Deepak Voora | November 25, 2020

Adaptive multi-channel event segmentation and feature extraction for monitoring health outcomes
IEEE Xplore
Geoff Ginsburg, Ricardo Henao and Chris Woods | November 17, 2020

Multiplexed, quantitative serological profiling of COVID-19 from a drop of blood by a point-of-care test
medRxiv
Chris Woods | November 7, 2020

At the intersection of precision medicine and population health: an implementation-effectiveness study of family health history based systematic risk assessment in primary care
BMC Health Services Research
Teji Rahkra-Burris, Geoff Ginsburg, Rachel Myers, Lori Orlando and Ryanne Wu | November 7, 2020

Outbreak of severe acute respiratory infection in Southern Province, Sri Lanka in 2018: a cross-sectional study
BMJ Open
Chris Woods | November 6, 2020

Platelet reactivity in response to aspirin and ticagrelor in African-Americans and European-Americans
Journal of Thrombosis and Thrombolysis
Deepak Voora and Geoff Ginsburg | November 6, 2020

SARS-CoV-2 Infections Among Children in the Biospecimens from Respiratory Virus-Exposed Kids (BRAVE Kids) Study
Clinical Infectious Diseases
Chris Woods | November 3, 2020

Impact of the COVID-19 pandemic on patterns of outpatient cardiovascular care
American Heart Journal
Ricardo Henao | November 1, 2020

The International Hundred Thousand Plus Cohort Consortium: integrating large-scale cohorts to address global scientific challenges
The Lancet Digital Health
Geoff Ginsburg | November 1, 2020

October

Variant Interpretation in Current Pharmacogenetic Testing
Journal of Personalized Medicine
Lori Orlando | October 31, 2020

Calibration and Uncertainty in Neural Time-to-Event Modeling
IEEE Transactions on Neural Networks and Learning Systems
Ricardo Henao | October 29, 2020

Selecting Mobile Health Technologies for Electronic Health Record Integration: Case Study
Journal of Medical Internet Research
Ryan Shaw | October 28, 2020

Treatment of comorbid sleep disorders and posttraumatic stress disorder in active duty military: Design and methodology of a randomized clinical trial
Contemporary Clinical Trials
Douglas Williamson | October 20, 2020

Health system utilization before age 1 among children later diagnosed with autism or ADHD
Scientific Reports
Ricardo Henao | October 19, 2020

Use of Natural Language Processing to Improve Identification of Patients With Peripheral Artery Disease
Circulation: Cardiovascular Interventions
Ricardo Henao | October 12, 2020

Machine-learning-based multiple abnormality prediction with large-scale chest computed tomography volumes
Medical Image Analysis
Ricardo Henao | October 9, 2020

Individualizing pharmacogenomic test results in context of the microbiome
Personalized Medicine
Susanne Haga | October 7, 2020

September

Global approaches to genomic medicine implementation
Science Translational Medicine
Geoff Ginsburg | September 30, 2020

Weakly supervised instance learning for thyroid malignancy prediction from whole slide cytopathology images
Medical Image Analysis
Ricardo Henao | September 25, 2020

A blood-based host gene expression assay for early detection of respiratory viral infection: an index-cluster prospective cohort study
The Lancet Infectious Diseases
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Anna Mazur, Micah McClain, Sunil Suchindran, Ephraim Tsalik and Chris Woods | September 24, 2020

The Line Snuggler: A Central Line Bundling Innovation Evaluated in a High-Risk Pediatric Population
Journal of Pediatric Oncology Nursing
Ryan Shaw | September 19, 2020

Variational Disentanglement for Rare Event Modeling
arXiv
Ricardo Henao | September 17, 2020

S ARS-CoV-2 Infections Among Children in the Biospecimens from Respiratory Virus-Exposed Kids (BRAVE Kids) Study
medRxiv
Chris Woods | September 1, 2020

August

Improved empiric antibiotic prescribing for acute cystitis with use of local urinary antibiogram and clinical decision support system
Infection Control and Hospital Epidemiology
Chris Woods | August 19, 2020

Identification of Undetected Monogenic Cardiovascular Disorders
Journal of the American College of Cardiology
Ricardo Henao | August 18, 2020

Protocol for Partner2Lose: A randomized controlled trial to evaluate partner involvement on long-term weight loss
Contemporary Clinical Trials
Ryan Shaw | August 1, 2020

July

Dysregulated transcriptional responses to SARS-CoV-2 in the periphery support novel diagnostic approaches
medRxiv
Thomas Burke, Florica Constantine, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold and Chris Woods | July 26, 2020

Association of Hepatic Steatosis With Major Adverse Cardiovascular Events, Independent of Coronary Artery Disease
Clinical Gastroenterology and Hepatology
Geoff Ginsburg and Deepak Voora | July 21, 2020

Influence of Sex on Platelet Reactivity in Response to Aspirin
Journal of the American Heart Association
Geoff Ginsburg, Rachel Myers and Deepak Voora | July 11, 2020

User-Centered App Design for Acutely Ill Children and Adolescents
Journal of Pediatric Oncology Nursing
Ryan Shaw | July 10, 2020

Corrigendum to “Neuroendocrine biomarkers of prolonged exposure treatment response in military-related PTSD”
Psychoneuroendocrinology
Douglas Williamson | July 10, 2020

June

S hared Genetic Etiology Underlying Late-Onset Alzheimer's Disease and Posttraumatic Stress Syndrome
Alzheimer's & Dementia
Douglas Williamson | June 26, 2020

Correction: Evaluating the Feasibility and Acceptability of a Mobile Health-Based Female Community Health Volunteer Program for Hypertension Control in Rural Nepal: Cross-Sectional Study
JMIR mHealth and uHealth
Ryan Shaw | June 11, 2020

Digital Phenotyping Self-Monitoring Behaviors for Individuals With Type 2 Diabetes Mellitus: Observational Study Using Latent Class Growth Analysis
JMIR mHealth and uHealth
Ryan Shaw | June 11, 2020

Neuroendocrine Biomarkers of Prolonged Exposure Treatment Response in Military-Related PTSD
Psychoneuroendocrinology
Douglas Williamson | June 8, 2020

T he Project Baseline Health Study: A Step Towards a Broader Mission to Map Human Health
NPJ | Digital Medicine
Geoff Ginsburg | June 5, 2020

May

Previously Derived Host Gene Expression Classifiers Identify Bacterial and Viral Etiologies of Acute Febrile Respiratory Illness in a South Asian Population
Open Forum Infectious Diseases
Thomas Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Sunil Suchindran, Ephraim Tsalik and Chris Woods | May 26, 2020

Towards digital-based interventions for medication adherence and safety
Expert Opinion on Drug Safety
Susanne Haga | May 5, 2020

April

The enduring importance of family health history in the era of genomic medicine and risk assessment
Personalized Medicine
Susanne Haga and Lori Orlando | April 22, 2020

Understanding the state of pharmacogenomic testing for thiopurine methyltransferase within a large health system
Personalized Medicine
Deepak Voora | April 20, 2020

Promoting Wellness Through Mobile Health Technology in a College Student Population: Protocol Development and Pilot Study
JMIR Research Protocols
Geoff Ginsburg, Susanne Haga and Ryan Shaw | April 3, 2020

Analytical evaluation of the Abbott RealTime CT/NG Assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in rectal and pharyngeal swabs
The Journal of Molecular Diagnostics
Ephraim Tsalik | April 2, 2020

March

Evaluating the Feasibility and Acceptability of a Mobile Health-Based Female Community Health Volunteer Program for Hypertension Control in Rural Nepal: Cross-Sectional Study
JMIR mHealth and uHealth
Ryan Shaw | March 9, 2020

E valuation of family health history collection methods impact on data and risk assessment outcomes
Preventive Medicine Reports
Geoff Ginsburg, Lori Orlando, Ryanne Wu | March 5, 2020

Self-monitoring diabetes with multiple mobile health devices
Journal of the American Medical Informatics Association
Ryan Shaw | March 5, 2020

February

Pharmacoepidemiology of Ceftazidime-Avibactam Use: A Retrospective Cohort Analysis of 210 US Hospitals
Clinical Infectious Diseases
Chris Woods | February 28, 2020

A transcriptional signature accurately identifies Aspergillus Infection across healthy and immunosuppressed states
Translational Research
Micah McClain | February 20, 2020

Application of a machine learning algorithm to predict malignancy in thyroid cytopathology
Cancer Cytopathology
Ricardo Henao | February 3, 2020

January

Enabling Technologies for Personalized and Precision Medicine
Trends in Biotechnology
Geoff Ginsburg | January 21, 2020

Mobile Health Technology for Pediatric Symptom Monitoring: A Feasibility Study
Nursing Research
Ryan Shaw | January 15, 2020

Differences in time-to-testing and time-to-isolation between community-onset and hospital-onset Clostridioides difficile cases at a tertiary care VA medical center
American Journal of Infection Control
Chris Woods | January 3, 2020

C aring for Children With Medical Complexity With the Emergency Information Form
Pediatric Emergency Care
Ryan Shaw | January 2020

2019

December

Increased Glutaminolysis Marks Active Scarring in Nonalcoholic Steatohepatitis Progression
Cellular and Molecular Gastroenterology and Hepatology
Ricardo Henao | December 24, 2019

G eospatial analysis of dengue emergence in rural areas in the Southern Province of Sri Lanka
Transactions of the Royal Society of Tropical Medicine & Hygiene
Chris Woods | December 24, 2019

Longitudinal RNA-seq Analysis of the Repeatability of Gene Expression and Splicing in Human Platelets Identifies A Platelet SELP Splice QTL
Circulation Research
Deepak Voora | December 19, 2019

Genomic Medicine Year in Review: 2019
American Journal of Human Genetics
Geoff Ginsburg | December 5, 2019

Reinforcement of an infection control bundle targeting prevention practices for Clostridioides difficile in Veterans Health Administration nursing homes
American Journal of Infection Control
Chris Woods | December 4, 2019

November

Simultaneous Evaluation of Diagnostic Assays for Pharyngeal and Rectal Neisseria gonorrheae and Chlamydia trachomatis Using a Master Protocol
Clinical Infectious Diseases
Ephraim Tsalik | November 17, 2019

Affiliate network members as force amplifiers of genomic medicine research
Personalized Medicine
Geoff Ginsburg | November 11, 2019

October

Epidemiologic Trends in Clostridioides difficile Infections in a Regional Community Hospital Network
JAMA Network Open
Chris Woods | October 30, 2019

R esults and Lessons of a Pilot Study of Cascade Screening for Familial Hypercholesterolemia in US Primary Care Practices
Journal of Internal medicine
Lori Orlando | October 30, 2019

Direct-from-blood RNA sequencing identifies the cause of post-bronchoscopy fever
BMC Infectious Diseases
Tom Burke, Ephraim Tsalik and Chris Woods | October 28, 2019

Awareness of family health history in a predominantly young adult population
PLOS One
Susanne Haga, Rachel Myers and Lori Orlando | October 25, 2019

Validation of a host response test to distinguish bacterial and viral respiratory infection
EBioMedicine
Tom Burke, Geoff Ginsburg, Ricardo Henao, Micah McClain, Elizabeth Petzold, Ephraim Tsalik and Chris Woods | October 17, 2019

Pharmacogenomic Testing In Pediatrics: Navigating The Ethical, Social, and Legal Challenges
Pharmacogenomics and Personalized Medicine
Susanne Haga | October 14, 2019

Specific Immunologic Countermeasure Protocol for Deep-Space Exploration Missions
Frontiers in Immunology
Geoff Ginsburg | October 11, 2019

C hildhood Trauma and Stressful Life Events Are Independently Associated with Sleep Disturbances in Adolescents
Behavioral Sciences
Douglas Williamson | October 10, 2019

I nternational meta-analysis of PTSD genome-wide association studies identifies sex- and ancestry-specific genetic loci
Nature Communications
Douglas Williamson | October 8, 2019

An electronic family health history tool to identify and manage patients at increased risk for colorectal cancer: protocol for a randomized controlled trial
Trials Journal
Teji Rakhra-Burris, Lori Orlando and Ryanne Wu | October 7, 2019

A stepwise approach to implementing pharmacogenetic testing in the primary care setting
Future Medicine
Susanne Haga and Ryanne Wu | October 7, 2019

September

Cost-Effectiveness of Multigene Pharmacogenetic Testing in Patients With Acute Coronary Syndrome After Percutaneous Coronary Intervention
Value in Health
Deepak Voora | September 25, 2019

C onvergent Evidence for Predispositional Effects of Brain Gray Matter Volume on Alcohol Consumption
Biological Psychiatry
Douglas Williamson | September 13, 2019

Clinical Utilization of Pharmacogenetics in Psychiatry - Perspectives of Pharmacists, Genetic Counselors, Implementation Science, Clinicians, and Industry
Pharmacopsychiatry
Susanne Haga | September 11, 2019

An mHealth intervention to improve medication adherence among patients with coronary heart disease in China: Development of an intervention
International Journal of Nursing Sciences
Ryan Shaw | September 8, 2019

Managing Increased Accessibility to Pharmacogenomic Data
Clinical Pharmacology and Therapeutics
Susanne Haga | September 3, 2019

August

Facilitating translational team science: The project leader model
Journal of Clinical and Translational Science
Geoff Ginsburg and Tim Veldman | August 28, 2019

A daptive platform trials: definition, design, conduct and reporting considerations
Nature Reviews
Elizabeth Petzold | August 28, 2019

Building evidence and measuring clinical outcomes for genomic medicine
The Lancet
Lori Orlando | August 5, 2019

Family health history: underused for actionable risk assessment
The Lancet
Geoff Ginsburg, Lori Orlando and Ryanne Wu | August 5, 2019

Opportunities, resources, and techniques for implementing genomics in clinical care
The Lancet
Geoff Ginsburg | August 5, 2019

I dentifying Smoking Environments From Images of Daily Life With Deep Learning
JAMA Network Open
Ricardo Henao | August 2, 2019

July

H ost-Based Diagnostics for Acute Respiratory Infections
Clinical Therapeutics
Ephraim Tsalik | July 25, 2019

What will it take to implement genomics in practice? Lessons from the IGNITE Network
Personalized Medicine
Geoff Ginsburg and Lori Orlando | July 23, 2019

S urveillance for Spotted Fever Group Rickettsial Infections: Problems, Pitfalls and Potential Solutions
The Journal of Infectious Disease
Micah McClain | July 3, 2019

A ccess to Genetic Counselors in the Southern United States
Journal of Personalized Medicine
Susanne Haga | July 1, 2019

June

Cardioprotective medication adherence among patients with coronary heart disease in China: a systematic review.
Heart Asia
Ryan Shaw | June 24, 2019

Pharmacogenomics courses in pharmacy school curricula
Pharmacogenomics
Susanne Haga | June 20, 2019

C hinese Physicians' Perspectives on the 2017 American College of Cardiology/American Heart Association Hypertension Guidelines: A Mobile App-Based Survey
High Blood Pressure & Cardiovascular Prevention
Ryan Shaw | June 14, 2019

P atient characteristics, experiences and perceived value of pharmacogenetic testing from a single testing laboratory
Personalized Medicine
Susanne Haga | June 13, 2019

E ducating healthcare providers in the delivery of genomic medicine
Personalized Medicine
Jenny McCarthy | June 13, 2019

F irst Responder to Genomic Information: A Guide for Primary Care Providers
Molecular Diagnosis & Therapy
Susanne Haga | June 7, 2019

A verage Weighted Accuracy (AWA): A Pragmatic Analysis for a RADICAL Study
Clinical Infectious Disease
Ricardo Henao, Ephraim Tsalik, and Chris Woods | June 3, 2019

E nhancing Diabetes Self-Management Through Collection and Visualization of Data From Multiple Mobile Health Technologies: Protocol for a Development Feasibility Trial
JMIR Publications
Ryan Shaw | June 3, 2019

May

P rimary Care Physicians' Knowledge, Attitudes, and Experiences with Personal Genetic Testing
Journal of Personalized Medicine
Susanne Haga, Geoff Ginsburg and Rachel Myers | May 24, 2019

Frontal Lobe Circuitry in Posttraumatic Stress Disorder
Chronic Stress
Douglas Williamson | May 23, 2019

T he Genomic Medicine Integrative Research Framework: A Conceptual Framework for Conducting Genomic Medicine Research
American Journal of Human Genetics
Lori Orlando | May 16, 2019

A n epidemiological evaluation of trauma types in cohort of deployed service members
Psychological Trauma: Theory, Research, Practice, and Policy
Douglas Williamson | May 9, 2019

Diabetes Mobile Care: Aggregating and Visualizing Data from Multiple Mobile Health Technologies
AMIA Summits on Translational Science Proceedings
Ryan Shaw | May 6, 2019

G enetic influenes on aspirin response in patients undergoing percutaneous coronary intervention
Cardiovascular Research
Deepak Voora | May 2, 2019

April

B ridging the integration gap between patient-generated blood glucose data and electronic health records
Journal of the American Medical Informatics Association
Ryan Shaw | April 22, 2019

The role of familial risk, parental psychopathology, and stress for first-onset depression during adolescence
Journal of Affective Disorders
Douglas Williamson | April 22, 2019

T wo Approaches to Classifying and Quantifying Physical Resilience in Longitudinal Data
The Journals of Gerontology
Micah McClain | April 17, 2019

A Decade On: Systematic Review of Clinical Trials.gov Infectious Disease Trials, 2007 - 2017
Open Forum Infectious Diseases
Ephraim Tsalik | April 15, 2019

R epeated ketamine infusions for antidepressant-resistant PTSD: Methods of a multicenter, randomized, placebo-controlled clinical trial
Contemporary Clinical Trials
Douglas Williamson | April 15, 2019

A host gene expression approach for identifying triggers of asthma exacerbations
PLOS One
Tom Burke, Geoff Ginsburg, Ricardo Henao, Anna Mazur, Micah McClain, Ephraim Tsalik and Chris Woods | April 8, 2019

Efficacy and Safety of Danirixin (GSK1325756) Co-administered With Standard-of-Care Antiviral (Oseltamivir): A Phase 2b, Global, Randomized Study of Adults Hospitalized With Influenza
Open Forum Infectious Diseases
Micah McClain | April 3, 2019